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🔬 Janelia Open Science Software Initiative
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Suite2p
Pipeline for processing two-photon calcium imaging data.
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Source code
Documentation
How to install
Get help
Open an issue on GitHub
Cite this software
Pachitariu, M., Stringer, C., Schröder, S., Dipoppa, M., Rossi, L. F., Carandini, M., & Harris, K. D. (2016). Suite2p: beyond 10,000 neurons with standard two-photon microscopy. BioRxiv, 061507.
Overview
GitHub README
Development Team:
Stringer Lab
License:
GPL-3.0
External links:
OSSI funding proposal
suite2p homepage
Pachitariu Lab
Stringer Lab
Python
GPL-3.0
Package
Calcium imaging
Neural recording
Google Colab
Local installation
Napari