Projects

Stitching-Spark

Reconstructing large microscopy images from overlapping image tiles on a high-performance Spark cluster.

Quick links

Get started

Source code Documentation How to install

Get help

Open an issue on GitHub Reach out with a question

Cite this software

Gao, R., Asano, S. M., Upadhyayula, S., Pisarev, I., Milkie, D. E., Liu, T. L., Singh, V., Graves, A., Huynh, G. H., Zhao, Y., Bogovic, J., Colonell, J., Ott, C. M., Zugates, C., Tappan, S., Rodriguez, A., Mosaliganti, K. R., Sheu, S. H., Pasolli, H. A., ... Betzig, E. (2019). Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution. Science, 363(6424), Article eaau8302. https://doi.org/10.1126/science.aau8302